Engineering and Scientific
This group includes packages for performing mathematical and scientific computations and plotting, as well as unit conversion.
- R - A language for data analysis and graphics
- SIBsim4 - Align expressed RNA sequences on a DNA template
- TeXmacs - Structured wysiwyg scientific text editor
- alliance - Alliance VLSI CAD Sytem
- atlas - Automatically Tuned Linear Algebra Software
- blacs - Basic Linear Algebra Communication Subprograms
- blas - The BLAS (Basic Linear Algebra Subprograms) library.
- cdo - A program for manipulating GRIB/NetCDF/SERVICE/EXTRA files
- cernlib-utils - CERN library compilation and environment setting scripts
- drawtiming - A command line tool for generating timing diagrams
- dx - Open source version of IBM's Visualization Data Explorer
- dx-samples - OpenDX Examples
- funtools - FITS library and utilities
- galculator - GTK 2 based scientific calculator
- gchempaint - A 2D chemical formulae drawing tool
- gdl - GNU Data Language
- geant321 - Particle detector description and simulation tool
- geda-docs - Documentation for gEDA
- geda-examples - Circuit examples for gEDA
- geda-gattrib - Attribute editor for gEDA
- geda-gnetlist - Netlister for the gEDA project
- geda-gschem - Electronics schematics editor
- geda-gsymcheck - Symbol checker for electronics schematics editor
- geda-symbols - Electronic symbols for gEDA
- geda-utils - Several utilities for the gEDA project
- genius - An arbitrary precision integer and multiple precision floatingpoint calculator
- geomview - Interactive 3D viewing program
- gerbv - Gerber file viewer from the gEDA toolkit
- gnome-chemistry-utils - A set of chemical utilities
- gnucap - The Gnu Circuit Analysis Package
- gnuplot - A program for plotting mathematical expressions and data
- gpredict - Real-time satellite tracking and orbit prediction program
- grace - Numerical Data Processing and Visualization Tool
- grads - Tool for easy acces, manipulation, and visualization of data
- gresistor - Gnome resistor color code calculator
- gtkwave - Waveform Viewer
- gts - GNU Triangulated Surface Library
- harminv - Program and library for solving the harmonic inversion problem
- hdf - A general purpose library and file format for storing scientific data
- hdf5 - A general purpose library and file format for storing scientific data
- hmmer - Profile HMM software for protein sequence analysis
- irsim - Switch-level simulator used even for VLSI
- kalgebra - MathML-based graph calculator
- kicad - Electronic schematic diagrams and printed circuit board artwork
- kpolynome - A polynome calculation program for KDE
- kst - A data viewing program for KDE
- ktechlab - Development and simulation of microcontrollers and electronic circuits
- lagan - Local, global, and multiple alignment of DNA sequences
- lam - The LAM (Local Area Multicomputer) programming environment.
- lapack - The LAPACK libraries for numerical linear algebra.
- libctl - Guile-based support for flexible control files
- libmatheval - Library for parsing and evaluating symbolic expressions input as text
- libtcd - Tide Constituent Database Library
- magic - A very capable VLSI layout tool
- ncarg - A Fortran and C based software package for scientific visualization
- nco - Suite of programs for manipulating NetCDF/HDF4 files
- ncview - A visual browser for netCDF format files
- netcdf - Libraries for the Unidata network Common Data Form (NetCDF v3)
- netgen - LVS netlist comparison tool for VLSI
- ngspice - A mixed level/signal circuit simulator
- numpy - A fast multidimensional array facility for Python
- octave - A high-level language for numerical computations
- octave-forge - Contributed functions for octave
- openbabel - Chemistry software file format converter
- osiv - Open Source Image Velocimetry
- paraview - Parallel visualization application
- paw - A program for the analysis and presentation of data
- pcb - An interactive printed circuit board editor
- perl-bioperl - Perl tools for computational molecular biology
- pharosc - VLSI and ASIC Technology Standard Cell Libraries
- pharosc-alliance - VLSI and ASIC Standard Cell Libraries for alliance
- pharosc-magic - VLSI and ASIC Standard Cell Libraries for Magic
- pharosc-synopsys - VLSI and ASIC Standard Cell Libraries for Synopsis
- pharosc-xcircuit - VLSI and ASIC Standard Cell Libraries for XCircuit
- pikdev - IDE for development of PICmicro based application (under Linux/KDE)
- piklab - Development environment for applications based on PIC & dsPIC microcontrollers
- pikloops - Code generator for PIC delays
- plotutils - GNU vector and raster graphics utilities and libraries
- pvm - Libraries for distributed computing.
- python-biopython - Python tools for computational molecular biology
- qalculate-gtk - A multi-purpose desktop calculator for GNU/Linux
- qalculate-kde - A multi-purpose desktop calculator for GNU/Linux
- qcad - Simple 2D CAD program
- qucs - Circuit simulator
- rrdtool - Round Robin Database Tool to store and display time-series data
- scalapack - A subset of LAPACK routines redesigned for heterogenous computing
- scigraphica - Scientific application for data analysis and technical graphics
- scrip - Spherical Coordinate Remapping and Interpolation Package (SCRIP)
- seaview - Graphical multiple sequence alignment editor
- sextractor - Extract catalogs of sources from astronomical images
- speedcrunch - A fast power user calculator for KDE
- tcd-utils - TCD (Tide Constituent Database) Utils
- tideEditor - Editor for Tide Constituent Database (TCD) files
- toped - IC Layout Editor
- units - A utility for converting amounts from one unit to another
- veusz - GUI scientific plotting package
- wcstools - Software utilities to display and manipulate the WCS of a FITS image
- wgrib - Manipulate, inventory and decode GRIB files
- wise2 - Tools for comparison of biopolymers
- wvs-data - World Vector Shoreline data
- xcircuit - Electronic circuit schematic drawing program
- xdrawchem - 2D chemical structures drawing tool
- xtide - Calculate tide all over the world